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1

A classical Master equation approach to modeling an artificial protein motor

Nathan J. Kuwada, Gerhard A. Blab, Heiner Linke

Journal:

Chemical Physics

Year:

2010

Language:

english

File:

PDF, 873 KB

english, 2010

2

Surface sensing and lateral subcellular localization of WspA, the receptor in a chemosensory-like system leading to c-di-GMP production

Jennifer R. O'Connor, Nathan J. Kuwada, Varisa Huangyutitham, Paul A. Wiggins, Caroline S. Harwood

Journal:

Molecular Microbiology

Year:

2012

Language:

english

File:

PDF, 1.28 MB

english, 2012

3

A Journey to the Pole: Polar Localization of Proteins in E. coli

Brown, Daniel B., Kim, Harry, Kuwada, Nathan J., Wiggins, Paul A.

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 51 KB

english, 2012

4

Synthetic, Protein-Based Molecular Motors

Kuwada, Nathan J., Zuckermann, Martin J., Curmi, Paul M.G., Bromley, Elizabeth H.C., Donadini, Roberta, Woolfson, Derek N., Forde, Nancy R., Linke, Heiner

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 34 KB

english, 2009

5

Simulation Studies of a TRI-PEDAL, Protein-Based Artificial Molecular Motor

Kuwada, Nathan J., Blab, Gerhard A., Zuckermann, Martin J., Curmi, Paul M.G., Bromley, Elizabeth H.C., Davies, Roberta, Woolfson, Derek N., Forde, Nancy R., Linke, Heiner

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 33 KB

english, 2010

6

Experimental Realization of a Feedback Controlled Flashing Ratchet

Lopez, Benjamin J., Kuwada, Nathan, Linke, Heiner

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 37 KB

english, 2009

7

Short-Time Dynamics E. Coli Chromosomal Loci Reveal a Dependence on Coordinate and Indicate the Presence of a Sporadic but Ubiquitous Super-Diffusive Motion

Javer, Avelino, Long, Zhicheng, Kuwada, Nathan J., Nugent, Eileen, Grisi, Marco, Siriwatwetchakul, Kamin, Collins, William, Flyamer, Ilya, Fraser, Gillian, Benza, Vincenzo G., Wiggins, Paul A., Dorfma

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 43 KB

english, 2014

8

Physical Modeling of Chromosome Segregation in E. Coli Reveals Impact of Force and DNA Relaxation

Lampo, Thomas J., Kuwada, Nathan J., Wiggins, Paul A., Spakowitz, Andrew J.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 42 KB

english, 2014

9

Proteome-Wide Characterization of Protein Localization Dynamics in Escherichia Coli

Kuwada, Nathan J., Wiggins, Paul A.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 148 KB

english, 2014

10

The Escherichia Coli Chromosome is segregated by Biased Diffusion

Kuwada, Nathan J., Wiggins, Paul A.

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 36 KB

english, 2013

11

Persistent super-diffusive motion of Escherichia coli chromosomal loci

Javer, Avelino, Kuwada, Nathan J., Long, Zhicheng, Benza, Vincenzo G., Dorfman, Kevin D., Wiggins, Paul A., Cicuta, Pietro, Lagomarsino, Marco Cosentino

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 473 KB

english, 2014

12

The Tumbleweed: Towards a synthetic protein motor

Bromley, Elizabeth H. C., Kuwada, Nathan J., Zuckermann, Martin J., Donadini, Roberta, Samii, Laleh, Blab, Gerhard A., Gemmen, Gregory J., Lopez, Benjamin J., Curmi, Paul M. G., Forde, Nancy R., Woolf

Journal:

Year:

2009

Language:

english

File:

PDF, 381 KB

english, 2009

13

Realization of a Feedback Controlled Flashing Ratchet

Lopez, Benjamin J., Kuwada, Nathan J., Craig, Erin M., Long, Brian R., Linke, Heiner

Journal:

Physical Review Letters

Year:

2008

Language:

english

File:

PDF, 354 KB

english, 2008

14

Cytoplasmic Dynamics Reveals Two Modes of Nucleoid-Dependent Mobility

Stylianidou, Stella, Kuwada, Nathan J., Wiggins, Paul A.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 1.33 MB

english, 2014

15

Tuning the performance of an artificial protein motor

Kuwada, Nathan J., Zuckermann, Martin J., Bromley, Elizabeth H. C., Sessions, Richard B., Curmi, Paul M. G., Forde, Nancy R., Woolfson, Derek N., Linke, Heiner

Journal:

Physical Review E

Year:

2011

Language:

english

File:

PDF, 806 KB

english, 2011

16

Physical Modeling of Chromosome Segregation in Escherichia coli Reveals Impact of Force and DNA Relaxation

Lampo, Thomas J., Kuwada, Nathan J., Wiggins, Paul A., Spakowitz, Andrew J.

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 700 KB

english, 2015

17

Genome-scale quantitative characterization of bacterial protein localization dynamics throughout the cell cycle

Kuwada, Nathan J., Traxler, Beth, Wiggins, Paul A.

Journal:

Molecular Microbiology

Year:

2015

Language:

english

File:

PDF, 18.80 MB

english, 2015

18

High-throughput cell-cycle imaging opens new doors for discovery

Kuwada, Nathan J., Traxler, Beth, Wiggins, Paul A.

Journal:

Current Genetics

Year:

2015

Language:

english

File:

PDF, 496 KB

english, 2015

19

Global Characterization of Transcription Factor Localization and Partitioning in Escherichia Coli

Kuwada, Nathan J., Wiggins, Paul A.

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 40 KB

english, 2015

20

The Bacterial Nucleoid Drives Cytoplasmic Dynamics

Stylianidou, Stella, Kuwada, Nathan J., Wiggins, Paul A.

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 38 KB

english, 2015

21

Quantitative Investigation of the Role of SeqA in Escherichia Coli Chromosome Segregation

Cass, Julie A., Kuwada, Nathan J., Wiggins, Paul A.

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 46 KB

english, 2015

22

Escherichia coli Chromosomal Loci Segregate from Midcell with Universal Dynamics

Cass, Julie A., Kuwada, Nathan J., Traxler, Beth, Wiggins, Paul A.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 2.01 MB

english, 2016

23

SuperSegger : Robust image segmentation, analysis and lineage tracking of bacterial cells

Stylianidou, Stella, Brennan, Connor, Nissen, Silas B., Kuwada, Nathan J., Wiggins, Paul A.

Journal:

Molecular Microbiology

Year:

2016

Language:

english

File:

PDF, 31.59 MB

english, 2016

24

Probing bacterial cell biology using image cytometry

Cass, Julie A., Stylianidou, Stella, Kuwada, Nathan J., Traxler, Beth, Wiggins, Paul A.

Journal:

Molecular Microbiology

Year:

2017

Language:

english

File:

PDF, 13.20 MB

english, 2017

25

Nucleoid-mediated positioning and transport in bacteria

Kisner, Jessica R., Kuwada, Nathan J.

Journal:

Current Genetics

Year:

2019

Language:

english

File:

PDF, 775 KB

english, 2019

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